Gene sequences

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Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015888272.1_cds_XP_016442839.1_38060
CDS Infomation	[gene=LOC107768241] [db_xref=GeneID:107768241] [protein=rRNA biogenesis protein RRP5] [protein_id=XP_016442839.1] [location=complement(join(20252..20359,20487..20570,20678..20908,20995..21150,21260..21356,21586..21762,21866..22251,22631..22729,23088..23271,23349..23494,25155..25212,26217..26844,27705..27855,28888..28962,29061..29214,30271..30371,30458..30541,31003..31148,31231..31399,32280..32381,32478..32552,32665..32745,33055..33161,34094..34159,34288..34433,35147..35281,36412..36548,38957..39031,39126..39311,40062..40184,40281..40394,41524..41616,43936..44007,44101..44223,44355..44473,50063..50162,61822..61998,64226..64369,65918..66132,66542..66701))] [gbkey=CDS]
Sequence	ATGGCACCTCCTTCAAAGAAATCCCAAAGCAAAAAGTTTTCTAAACCCGCTTCAATGAAT GTTCAAAATCCATCTAAAAAACCATTCAAGGCCAAAGGCAAAGGCGACGTTTCAACCATG CCCCTTCAGCTTGAAGACGACGTTCCTGACTTCCCTAGAGGTGGGGGAAGTTCTTTGAGT AGAGAGGAATTGGATGAAGTTCGAGCTGAGGTGGATGCAGAGTTTGAGGCTGAAGAGAGA TTGTTGAAGAAGAAGGGGAAGAAGCAAAACAAGGTGCAACGGAGTAGTCAATCAACAGAA GATGACTTAGGTTCGCTTTTTGGCGGTGGCATCAATGGGAAATTGCCGAGGTTTGCTAAC AGGATCACTTTAAAGAATATATCTCCTGGAATGAAGCTCTGGGGAGTGGTTTCTGAAGTA AATGAGAAAGATATTGTTGTCAGTCTCCCAGGAGGCTTGCGGGGGTTGGTTCGAGCATCT GAAGCAGTTCCTCCTTTTGTGAAGGATGGAGCAAAAATGTCGGAGATGAACACCAATCTC CTTTCTAGTGTATATCACGTCGGGCAGCTTGTTTCTTGCATCGTCTTGCATTTGGATGAC GACAAGAAAGAAGCGGGGAAGAGAAAACTTTGGCTTTCTTTGCGTCTCGCTTTATTGCAC AAGAGTTTAACTCTTGACGTTATTCAAGAAGGAATGATTCTTAGTGCATATGTGAAAAGC ATGGAAGACCATGGCTATATGCTTCATTTTGGGCTGCCTTCCTTCTCTGGATTTATGCCA AAAGATAATGAATCAGCAAATGTGGAAGTTAAGAGTAGAAGTGGGCAGCTGGTACAAGGG GTTGTTAAAAGTATTGATAGAACACGTAAAGTAGTTTATTTGAGTTCGGATCCTGATGTG GTCTCAAAATGTGTGACCAAGGATCTTAAGGGTATCTCAATTGATCTACTCGTTCCAGGC ATGATGGTTAATGCTAGTGTGCGTTCAATACTTGAAAATGGAATTATGTTATCATTCCTC ACGTACTTTACAGGAACAGCTGATATGTTCAATCTGCAGCAAACTTTCCCCTCTTCCGGT TGGAAGATTGATTATCCTCAAAATAAAAAGGTTAATGCTCGGATACTATTTATTGATCCC TCAACTAGAGCTGTTGGTTTGACATTGAATTCTCACCTGGTTCACAACAAGGCTCCTCCT GCACTTATCAAGGTTGGAGATATTTTTGATCAATCAAAAGTGATCAGGATTGATAGGGGT TTGGGCCTTTTGCTGGAAATTCCCTCTTCCCCAGTTCCAACTCCGGCATATGTCAATGTA TCTGACGTTGCTGATAAGGAAGTGAAGAAGCTGGAGAAAAGCTTCAAGGAAGGGAAAGTT GTCCGCGTCAGGGTTCTTGGGTTTAGGCATCTGGAAGGACTTGCTACTGGGGTTTTAAAG ACCAGTGCATTTGAGGGATCAGTTTTCACTCACTCAGATGTCAAACCTGGGATGGTGGTA AAAGCTAAAGTCATTGCAGTAGACAGCTTTGGTGCCATAGTTCAATTTTCTAGTGGTGTG AAAGCACTTTGTCCTCTTCGTCATATGTCAGAATTTGAAATTGTAAAACCCAGGAAAAAA TTCCAGGTCGGAGCAGAATTAGTTTTTCGTATTCTTGGTTGCAAGTCAAAGAGGATTACT GTTACACACAAGAAAACACTAGTTAAATCAAAACTTGAAATTCTTGGCTCTTATGCTGAT GCTACTGAAGGACTAATAACACATGGATGGATAACGAAGATTGAAAACCACGGTTGCTTT GTCCGCTTTTACAATGGAGTACAAGGATTTGCCCCTAGATCTGAACTTGGACTAGATCCG TGCTGTGAAATAAGTTCCATGTATCACGTAGAACAAGTGGTGAAATGTAGAGTTACCAGT TCTAATCCGGCTTCACGGCGTATTAACCTCAGTTTGACAACAACACCCTCAAGGGTATCT AGCAATGAACTGGTCAAACCAGGAAAGATTGTTTCTGGAGTGGTTGAGCGAGTAACTGCC GATGCAGTTGTCATAGATGTTACTGCTCAGGGTCATTTTAAGGGCACAATCTCTCCTCAA CACTTGGCTGATCACACTGGCCATGCTGAGTTGATGAAGTCTGCCTTGAGGCCTGGGTAT GAGTTCGATCAGCTTTTGGTTCTTGATGTTGAGGGCAGCAATTTAATACTCTCTGCAAAA CATTCTCTTGCGACCTCAGCTCAGCAGCTTCCGCTGGATGTTAGTCAAGTCCATCTTAAC TCTGTGCTGCATGGGTATATTTGTAATATAATTGAAAGTGGTGTCTTCATTCGCTACCTC GGGCGTTTGACTGGTTTTTCTCCAAGAAACAGGGCTACTGATGACAGAAGATTTAGTCTT TCTGAAGTTTACCAGATTGGACAGTCTGTCCGCTCTAACGTAGTTGATGTTAGCAGTGAA ACAAATCGAATTACAGTTTCTTTGAAGCAGTCGTTCTGCTCTTCAACAGATGCATCCTTT ATTGAAGAATACTTCCTTATGGAGGAGAAGATTGCAAAGCTGCAGTTGGTGGACTCTGGA AGTTCTGACCTAAGATGGGTGGAAGAATTTAATCTTGGTAGCACCGTGAAGGGAAAAGTT CATGAAATAAAGGAATTTGGTGTTGTAGTAAGCTTTCAGAAATATGATGATGTTTTTGGT TTTATCTCCCACTATCAGTTAGGTGGAATCTCTGTGGAGACTGGCTCAAGTATTCGAACC ACAGTACTTGATGTTTCCAAGATAGAACGCCTAGTGGATCTGTCTTTGAAGCCAGCTTTT GTGAATAAATCAAAGAAAGAGACCACTAATAATCAAGCCCAGAAGAAACGCAAGAGGGAA GCACTTGGGGAATTGGAAGTAAATCAAACTGTAAATGCAGTTGTGGAGATTGTTAAAGAA AATTACTTGGTGGTTTCACTACCATCATATAATAACACTCTTGGATATGCATCACGAGCT GATTACAACACTCAAAATCTACCCCCTAAATCATTTGCCAATGGAGAGAGTGTCATTGCC ACTGTTATGGCCATTCCCCCTCCTTCAACAAGTGGGAGATTGCTGCTGCTGCTTAAATCT ATTAGTGAAGCTATTGAAACTTCGAGTTCCAAGAGGGCTAAAAAGAAATCTAGTTATAAT GCTGGGTCGCTGGTTCAGGCAGAGATTACTGAAATAAGGCCACTTGAACTGAGACTAAAA TTTGGGTCCGGTTTCCATGGGAGGGTGCACATAACAGAGGCATCAGATGACAATCATGCT GAAGCTCCATTTAGTAACTTCAGATTTGGGCAGACTCTTACTGCAAGGATTATTTCAAAG TTTAATATGTCAGAAAGTATTAAGAGAGGCTATCAGTGGGAGCTATCCATTAAACTATCC ACACTTGCAGGATCTGGTGAAATTGAACCCGTTGAAGAATTCAATTATTCAACCGGCCAA CTCGTTACTGGCTTTGTGTACAAAGTTGACAATGAATGGGCTTGGCTAACGATATCTCGA GATGTTAAGGCCCAGCTCCACGTCTTAGATAGCTCAAGTGAGCCTAGTGAGCTAGATGAA TTTCAGAAAAGGTTCTTTATCGGCAGGTCTTTTTCCGGTTATGTTTTAAGTGCTAATAAG GAGAAGAAGTTGGTGCGTTTGATTTCACGACCACTGTTGGTTGACCTGGAAAGATCTGCC CATCAAAAAGATGGACCAATGGATCATTCAAGTGAAAATATGGCATTTCATATTCGTGAA GACAGTGTTTTGGGTGGCAGGATTTCCAAAATCCTTCCAGGTGTTGGTGGATTGCTTGTT CAGATTGATCCACACCTATATGGTAAGGTTCATTTCACTGAACTGACAGATCCAGGGGTT GCTGATCCGCTGTCTGGATATCATGAAGGACAATTTGTAAAGTGCAAAGTTCTGGAGACT ACTCATTCAGGCAAGGGCACTGTTCATATTGACCTCTCACTGCGGTCTATGTCACACAGA ACCCAGGAGCAGAAGCTTGCTGTAAACAATGACACTGTGAATTTTCCTGGATTGGTGGAG AAGATAGAGGATCTTCGTCCAAATATGGTGGTGCAGGCATATGTGAAAAATGTTACACCG AAAGGATGTTTCGTAATGCTTTCGCGGAAAGTTGATGCGAAAGTTCTCCTCTCAAACTTG TCTGATGGCTATGTTGAAAACCCGGAGAAAGAATTCCCTGTTGGGAAACTTGTCGTTGGC AAAGTGGTGTCAGTGGAGCTATTGTCTAAGCGAGTTGAAGTCACTCTAAGGACATCAAGT GCAGTTGGTGCTTCCAAGTCTGATAAAGATGCTCTAAGTAATTTGACTGTTGGGGATGTC ATATCTGGCAGAGTTAAGCGAGTTGAACCGTATGGCTTGTTTATCTTAGTTGACAACACA AACATGGTTGGATTGTGCCATGTTTCAGAGATCTCTGACGATCATGTCAACAATATTGAC TCTAGATACAAAGCTGGAGATAGAGTGACGGCAAAGATTTTGAAGGTGGATAAGGAAAGA CAGAGAATATCACTTGGGATGAAGAATTCATATTTTAATGATGCTACAAGTGGTGAAACA AATATAAGGCACAGTTCTGGTTATCCAGTGGAAGGAAATGCTCTTTCCATAGGTATCGAG TCAACTCCTTCACCTGAGAGGAGCTCCCAAGAACGAGAGAATCTCGACGGTGAATCTGTA GATGCGACCGACCCGTTCCTTGCTGAAGTTGAATCTCGGGCATCAATACCACCATTGGAG GTCCCACTTGATGATATAGAAAATTTGGATGAGGACGATATAGTTAATCAAGACTCAGGT GATGCTAGCAATTTAGGTACTTCAGATGAAAAGAACAAGAAACTTGCAGCAAAGAAAGCT AAAAGATTGAGGGAACAAGAAATTAGAGCTGCTGAGGAAAGATTACTGGAAAAAGATATT CCCAGAGATGAAGATGAGTTTGAGAAATTAGTTAGAAGTTCCCCAAATAGCAGCTTTGTC TGGATAAAATACATGGCATTTGTGCTGTCTTTGGCTGATGTTGAGAAGGCACGCTCAATT GCTGAACGAGCTTTGAGGACAATAAATGTTCGAGAAGAGTCAGAGAAGCTGAATGTTTGG GTTGCCTACTTTAATTTAGAAAATGAGTATGGAAATCCCCCACAGGAAGCTGTTGCAAAA GTATTCCAAAGAGCATTGCAGTATTGTGATCCCAAAAAGGTGCATCTGGCCTTGTTAGGA ATGTATGAGAGGACCGAGCAACACACACTCTCAGATGAACTGCTTAACAAGATGGTTAAG AAGTTCAAGCATTCGTGCAAGGTTTGGCTCAGGCGGGTTCAGTGGCTATTGAAACAAAGC CAAGATGGAGTCCAGTCAGTGGTGAATCGTGCTTTACTAAGTCTTTCTCCGCACAAGCAT ATTAAGTTTATTTCACAGACAGCTATTTTAGAGTTCAAGTGTGGGGTTCCTGACAGGGGT CGCTCCTTGTTTGAGAAAATGCTTCGCGAGTATCCCAAGAGAACTGACTTGTGGAGTGTT TATCTTGATCAAGAGATTCGACTAGGAGATGCTGATGTGATCCGTGCTTTATTTGAAAGG GCAATTACTCTTAGCCTTCCACCCAAAAAGATGAAGTTCCTTTTTAAGAAGTATCTTGAG TATGAGAAGATGCTTGGTGATGTCGATCGTATGGAGGCTGTGAAAAGAAAAGCAATGGAA TATGTTGAGAGCACTCTTAATTAA

Peptide Sequence

PEP ID	XP_016442839.1
PEP Infomation	PREDICTED: rRNA biogenesis protein RRP5 [Nicotiana tabacum]
Sequence	MAPPSKKSQSKKFSKPASMNVQNPSKKPFKAKGKGDVSTMPLQLEDDVPDFPRGGGSSLS REELDEVRAEVDAEFEAEERLLKKKGKKQNKVQRSSQSTEDDLGSLFGGGINGKLPRFAN RITLKNISPGMKLWGVVSEVNEKDIVVSLPGGLRGLVRASEAVPPFVKDGAKMSEMNTNL LSSVYHVGQLVSCIVLHLDDDKKEAGKRKLWLSLRLALLHKSLTLDVIQEGMILSAYVKS MEDHGYMLHFGLPSFSGFMPKDNESANVEVKSRSGQLVQGVVKSIDRTRKVVYLSSDPDV VSKCVTKDLKGISIDLLVPGMMVNASVRSILENGIMLSFLTYFTGTADMFNLQQTFPSSG WKIDYPQNKKVNARILFIDPSTRAVGLTLNSHLVHNKAPPALIKVGDIFDQSKVIRIDRG LGLLLEIPSSPVPTPAYVNVSDVADKEVKKLEKSFKEGKVVRVRVLGFRHLEGLATGVLK TSAFEGSVFTHSDVKPGMVVKAKVIAVDSFGAIVQFSSGVKALCPLRHMSEFEIVKPRKK FQVGAELVFRILGCKSKRITVTHKKTLVKSKLEILGSYADATEGLITHGWITKIENHGCF VRFYNGVQGFAPRSELGLDPCCEISSMYHVEQVVKCRVTSSNPASRRINLSLTTTPSRVS SNELVKPGKIVSGVVERVTADAVVIDVTAQGHFKGTISPQHLADHTGHAELMKSALRPGY EFDQLLVLDVEGSNLILSAKHSLATSAQQLPLDVSQVHLNSVLHGYICNIIESGVFIRYL GRLTGFSPRNRATDDRRFSLSEVYQIGQSVRSNVVDVSSETNRITVSLKQSFCSSTDASF IEEYFLMEEKIAKLQLVDSGSSDLRWVEEFNLGSTVKGKVHEIKEFGVVVSFQKYDDVFG FISHYQLGGISVETGSSIRTTVLDVSKIERLVDLSLKPAFVNKSKKETTNNQAQKKRKRE ALGELEVNQTVNAVVEIVKENYLVVSLPSYNNTLGYASRADYNTQNLPPKSFANGESVIA TVMAIPPPSTSGRLLLLLKSISEAIETSSSKRAKKKSSYNAGSLVQAEITEIRPLELRLK FGSGFHGRVHITEASDDNHAEAPFSNFRFGQTLTARIISKFNMSESIKRGYQWELSIKLS TLAGSGEIEPVEEFNYSTGQLVTGFVYKVDNEWAWLTISRDVKAQLHVLDSSSEPSELDE FQKRFFIGRSFSGYVLSANKEKKLVRLISRPLLVDLERSAHQKDGPMDHSSENMAFHIRE DSVLGGRISKILPGVGGLLVQIDPHLYGKVHFTELTDPGVADPLSGYHEGQFVKCKVLET THSGKGTVHIDLSLRSMSHRTQEQKLAVNNDTVNFPGLVEKIEDLRPNMVVQAYVKNVTP KGCFVMLSRKVDAKVLLSNLSDGYVENPEKEFPVGKLVVGKVVSVELLSKRVEVTLRTSS AVGASKSDKDALSNLTVGDVISGRVKRVEPYGLFILVDNTNMVGLCHVSEISDDHVNNID SRYKAGDRVTAKILKVDKERQRISLGMKNSYFNDATSGETNIRHSSGYPVEGNALSIGIE STPSPERSSQERENLDGESVDATDPFLAEVESRASIPPLEVPLDDIENLDEDDIVNQDSG DASNLGTSDEKNKKLAAKKAKRLREQEIRAAEERLLEKDIPRDEDEFEKLVRSSPNSSFV WIKYMAFVLSLADVEKARSIAERALRTINVREESEKLNVWVAYFNLENEYGNPPQEAVAK VFQRALQYCDPKKVHLALLGMYERTEQHTLSDELLNKMVKKFKHSCKVWLRRVQWLLKQS QDGVQSVVNRALLSLSPHKHIKFISQTAILEFKCGVPDRGRSLFEKMLREYPKRTDLWSV YLDQEIRLGDADVIRALFERAITLSLPPKKMKFLFKKYLEYEKMLGDVDRMEAVKRKAME YVESTLN

Transcript Sequence

Gene sequence data has not been registered.